Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs6757754 chr2:100951273 C/T 1.92E-5 289 24.8 26.1 23.32 KM Plot
KIRP rs67652222 chr6:27586220 C/T 1.21E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs67662114 chr6:27932301 G/A 2.01E-8 288 25.62 26.4 9.77 KM Plot
KIRP rs6767548 chr3:61713607 C/A 6.65E-5 289 26.37 26.28 17.3 KM Plot
KIRP rs677700 chr11:86180014 A/G 0.000144 287 10.7 21.63 26.37 KM Plot
KIRP rs6780357 chr3:125788207 C/T 9.15E-5 289 26.38 22.37 10.08 KM Plot
KIRP rs67859638 chr6:27357978 A/G 1.81E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs6788537 chr3:197161849 C/A 7.85E-5 275 25.53 26.77 19.77 KM Plot
KIRP rs679076 chr11:86194819 T/C 0.00012 285 10.7 21.63 26.37 KM Plot
KIRP rs67981811 chr6:28354835 C/G 2.0E-8 284 25.58 26.37 9.77 KM Plot
KIRP rs67998226 chr6:28238059 T/C 0 289 25.6 26.58 9.38 KM Plot
KIRP rs6800438 chr3:99924774 A/C 0.000111 278 24.73 31.13 12.1 KM Plot
KIRP rs6814934 chr4:149362869 G/C 5.0E-5 278 23.42 32.93 19.77 KM Plot
KIRP rs68167482 chr6:110797945 T/TC 4.7E-6 280 18.57 22.57 26.4 KM Plot
KIRP rs68184589 chr4:160515233 C/T 7.43E-12 288 25.58 34.3 8.6 KM Plot